GEN • GEN: Michael Cooley's Genetic Genealogy Blog
[ ARTICLES]*
14 May 2016
Y-STRs and Genetic Distance
DYS 393
DYS 390
DYS 19
DYS 391
DYS 385a
DYS 385b
DYS 426
DYS 388
DYS 439
DYS 389i
DYS 458
DYS 389ii
13
25
14
10
11
13
12
12
12
13
14
29
12-Marker Y-STRs
Any man who has tested his Y chromosome has certainly looked at a chart
something like the above. I say man because only men have a Y
chromosome—and it carries the male sex gene, called the SRY
gene—which is inherited only from their fathers. Because there is no
female sex gene, a woman is a woman because she lacks SRY, and lacks it
simply because she has no Y chromosome. A mother, therefore, cannot pass a
Y chromosome from her father to her descendants because SRYs do not "skip a
generation." It's as simple as that. Although other chromosomes come in
pairs, the Y doesn't. Perhaps one might say it's an eternal bachelor
because it has nothing with which to pair. This bachelor "reproduces"
itself by cloning itself and passing the copies to his sons—generation
after generation. This means a man's Y looks like his paternal 6th
great-grandfather's Y. It is the same Y, even if it gets modified a
bit every few generations. Due to European naming conventions, the Y
generally appears to follow the surname.
The chart above is an example of Short Tandem Repeats (STRs).
They're just that: short strings of DNA that are repeated in tandem to one
another n number of times. For example, strings of TCTA appear in
the Y chromosome at position DYS391 (column 4).
In this case, they repeat 10 times.
SIDEBAR: DNA is comprised of four chemical bases, as follows, the
names abbreviated to A, G, T and C. The above example, then, is a sequence
of thymine, cytosine, thymine, and adenine strung together 10 times.
Genetic Distance
Here we compare two testers by determining their genetic
distance:
DYS 393
DYS 390
DYS 19
DYS 391
DYS 385a
DYS 385b
DYS 426
DYS 388
DYS 439
DYS 389i
DYS 458
DYS 389ii
13
24
15
11
11
13
12
12
10
13
11
30
14
23
15
10
14
15
11
13
11
14
12
32
1
1
0
1
3
2
1
1
1
1
1
2
Total Genetic Distance = 15
Using simple subtraction, find the difference between the paired values
and note the grand total, which is the genetic distance (GD). This example
has a GD of 15 out of 12 markers. What does that mean? For testers
to be of the same family, they should have a genetic distance no greater
than 1 out of 12 markers. But even that can be misleading. At twelve
markers, many of us match with people across several geographic regions and
surnames. But that match often falls apart once more markers are tested.
For this reason, The Cooley DNA Project requests that members order
37 markers. Some admins prefer to see 67 markers.
The upshot is that even if the two men represented above had the same
surname, they're not related. The genetic distance is simply far too
great.
Interpretation
Make no mistake about it, this is science. But all science needs
interpretation, and interpretation is an art, especially with a science as
new as genetic genealogy. This is particularly true of STRs for the very
reason that they tend to be fickle. Those numbers can go up and then back
down in a subsequent generation. That's why GD is so important. It looks
at the overall trend in a group of related subjects. A trained eye,
however, can sometimes spot patterns. But, alas, patterns can be gained and
lost with additional data.